Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.4■□□□□ 0.22
NKX6-1P78426 CLEC4GP1-201ENST00000596555 870 ntBASIC16.4■□□□□ 0.22
NKX6-1P78426 AC069148.1-201ENST00000608741 768 ntBASIC16.4■□□□□ 0.22
NKX6-1P78426 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NKX6-1P78426 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NKX6-1P78426 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.4■□□□□ 0.22
NKX6-1P78426 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.4■□□□□ 0.22
NKX6-1P78426 AC005332.1-201ENST00000577698 1310 ntBASIC16.4■□□□□ 0.22
NKX6-1P78426 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
NKX6-1P78426 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
NKX6-1P78426 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NKX6-1P78426 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NKX6-1P78426 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NKX6-1P78426 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NKX6-1P78426 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.39■□□□□ 0.21
NKX6-1P78426 AL353719.1-201ENST00000566847 864 ntBASIC16.39■□□□□ 0.21
NKX6-1P78426 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.39■□□□□ 0.21
NKX6-1P78426 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NKX6-1P78426 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
NKX6-1P78426 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NKX6-1P78426 AC116407.4-201ENST00000623319 1061 ntBASIC16.39■□□□□ 0.21
NKX6-1P78426 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.39■□□□□ 0.21
NKX6-1P78426 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.39■□□□□ 0.21
NKX6-1P78426 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.39■□□□□ 0.21
NKX6-1P78426 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 TEX21P-204ENST00000641479 1693 ntBASIC16.39■□□□□ 0.21
NKX6-1P78426 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NKX6-1P78426 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NKX6-1P78426 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.39■□□□□ 0.21
NKX6-1P78426 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-1P78426 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-1P78426 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NKX6-1P78426 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX6-1P78426 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.38■□□□□ 0.21
NKX6-1P78426 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX6-1P78426 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-1P78426 AL023973.1-201ENST00000624619 620 ntBASIC16.38■□□□□ 0.21
NKX6-1P78426 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-1P78426 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NKX6-1P78426 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.38■□□□□ 0.21
NKX6-1P78426 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX6-1P78426 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-1P78426 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NKX6-1P78426 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX6-1P78426 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX6-1P78426 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX6-1P78426 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX6-1P78426 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-1P78426 AL441883.1-201ENST00000566170 1045 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms