Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
IRX4P78413 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 HTR7P1-202ENST00000624664 4411 ntBASIC19.35■□□□□ 0.69
IRX4P78413 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.34■□□□□ 0.69
IRX4P78413 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
IRX4P78413 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
IRX4P78413 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.34■□□□□ 0.69
IRX4P78413 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
IRX4P78413 PCED1CP-201ENST00000419887 785 ntBASIC19.34■□□□□ 0.69
IRX4P78413 KRT18P16-201ENST00000510337 1294 ntBASIC19.34■□□□□ 0.69
IRX4P78413 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.34■□□□□ 0.69
IRX4P78413 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 AC011298.2-201ENST00000617989 482 ntBASIC19.34■□□□□ 0.69
IRX4P78413 TFP1-202ENST00000475455 1573 ntBASIC19.34■□□□□ 0.69
IRX4P78413 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 RCC2P6-201ENST00000526625 1557 ntBASIC19.34■□□□□ 0.69
IRX4P78413 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
IRX4P78413 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
IRX4P78413 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
IRX4P78413 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.34■□□□□ 0.69
IRX4P78413 AC104581.1-202ENST00000635932 2618 ntBASIC19.34■□□□□ 0.69
IRX4P78413 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
IRX4P78413 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX4P78413 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
IRX4P78413 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
IRX4P78413 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IRX4P78413 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.33■□□□□ 0.69
IRX4P78413 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.33■□□□□ 0.69
IRX4P78413 AC116351.2-201ENST00000606540 1585 ntBASIC19.33■□□□□ 0.69
IRX4P78413 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IRX4P78413 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IRX4P78413 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
IRX4P78413 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 YBX1P10-201ENST00000444752 975 ntBASIC19.33■□□□□ 0.68
IRX4P78413 CCR12P-201ENST00000446203 998 ntBASIC19.33■□□□□ 0.68
IRX4P78413 FAM207BP-201ENST00000447172 505 ntBASIC19.33■□□□□ 0.68
IRX4P78413 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX4P78413 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX4P78413 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
IRX4P78413 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.33■□□□□ 0.68
IRX4P78413 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.33■□□□□ 0.68
IRX4P78413 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
IRX4P78413 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
IRX4P78413 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX4P78413 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.33■□□□□ 0.68
IRX4P78413 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX4P78413 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IRX4P78413 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IRX4P78413 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX4P78413 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
IRX4P78413 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IRX4P78413 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
IRX4P78413 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX4P78413 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms