Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AL390955.1-201ENST00000428694 934 ntBASIC16.27■□□□□ 0.2
HIST1H3AP68431 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AP003041.3-201ENST00000527151 707 ntBASIC16.27■□□□□ 0.2
HIST1H3AP68431 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.27■□□□□ 0.19
HIST1H3AP68431 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HIST1H3AP68431 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST1H3AP68431 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.27■□□□□ 0.19
HIST1H3AP68431 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST1H3AP68431 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.27■□□□□ 0.19
HIST1H3AP68431 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HIST1H3AP68431 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST1H3AP68431 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
HIST1H3AP68431 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 TSPY14P-201ENST00000303979 915 ntBASIC16.26■□□□□ 0.19
HIST1H3AP68431 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 MIR1238-201ENST00000408483 83 ntBASIC16.26■□□□□ 0.19
HIST1H3AP68431 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 CCR12P-201ENST00000446203 998 ntBASIC16.26■□□□□ 0.19
HIST1H3AP68431 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST1H3AP68431 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST1H3AP68431 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.25■□□□□ 0.19
HIST1H3AP68431 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 WWOX-216ENST00000569818 525 ntBASIC16.25■□□□□ 0.19
HIST1H3AP68431 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 AL354751.1-201ENST00000412768 1863 ntBASIC16.25■□□□□ 0.19
HIST1H3AP68431 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST1H3AP68431 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST1H3AP68431 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms