Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SKP1P63208 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.68■□□□□ 0.42
SKP1P63208 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.68■□□□□ 0.42
SKP1P63208 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SKP1P63208 AC073508.3-201ENST00000619697 1419 ntBASIC17.68■□□□□ 0.42
SKP1P63208 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
SKP1P63208 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SKP1P63208 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SKP1P63208 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SKP1P63208 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SKP1P63208 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SKP1P63208 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.67■□□□□ 0.42
SKP1P63208 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SKP1P63208 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SKP1P63208 AC006333.2-201ENST00000607957 2099 ntBASIC17.67■□□□□ 0.42
SKP1P63208 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.67■□□□□ 0.42
SKP1P63208 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SKP1P63208 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.67■□□□□ 0.42
SKP1P63208 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.67■□□□□ 0.42
SKP1P63208 AC034232.1-201ENST00000506026 1064 ntBASIC17.67■□□□□ 0.42
SKP1P63208 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SKP1P63208 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SKP1P63208 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
SKP1P63208 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SKP1P63208 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 Z98044.1-201ENST00000632503 1764 ntBASIC17.66■□□□□ 0.42
SKP1P63208 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SKP1P63208 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SKP1P63208 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.66■□□□□ 0.42
SKP1P63208 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.66■□□□□ 0.42
SKP1P63208 KRT18P23-201ENST00000435622 1283 ntBASIC17.66■□□□□ 0.42
SKP1P63208 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.66■□□□□ 0.42
SKP1P63208 KRT18P57-201ENST00000443599 1254 ntBASIC17.66■□□□□ 0.42
SKP1P63208 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SKP1P63208 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SKP1P63208 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.66■□□□□ 0.42
SKP1P63208 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.66■□□□□ 0.42
SKP1P63208 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SKP1P63208 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SKP1P63208 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.65■□□□□ 0.42
SKP1P63208 AC112777.1-201ENST00000540175 1423 ntBASIC17.65■□□□□ 0.42
SKP1P63208 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.65■□□□□ 0.42
SKP1P63208 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.65■□□□□ 0.42
SKP1P63208 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 AC018445.3-201ENST00000624177 1945 ntBASIC17.65■□□□□ 0.42
SKP1P63208 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.65■□□□□ 0.42
SKP1P63208 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.65■□□□□ 0.42
SKP1P63208 RCN1P1-201ENST00000400413 996 ntBASIC17.65■□□□□ 0.42
SKP1P63208 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.65■□□□□ 0.42
SKP1P63208 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.65■□□□□ 0.42
SKP1P63208 KRT18P41-201ENST00000518924 1277 ntBASIC17.65■□□□□ 0.42
SKP1P63208 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.65■□□□□ 0.42
SKP1P63208 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 MIR3180-4-201ENST00000582223 153 ntBASIC17.65■□□□□ 0.42
SKP1P63208 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SKP1P63208 MTMR9LP-203ENST00000426597 1545 ntBASIC17.65■□□□□ 0.42
SKP1P63208 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms