Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
AP1S1P61966 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.73■□□□□ 0.59
AP1S1P61966 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AP1S1P61966 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
AP1S1P61966 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.73■□□□□ 0.59
AP1S1P61966 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.73■□□□□ 0.59
AP1S1P61966 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.73■□□□□ 0.59
AP1S1P61966 AC022616.7-201ENST00000525383 220 ntBASIC18.73■□□□□ 0.59
AP1S1P61966 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.73■□□□□ 0.59
AP1S1P61966 MIR3917-201ENST00000580971 93 ntBASIC18.73■□□□□ 0.59
AP1S1P61966 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.73■□□□□ 0.59
AP1S1P61966 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
AP1S1P61966 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S1P61966 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP1S1P61966 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.72■□□□□ 0.59
AP1S1P61966 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
AP1S1P61966 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 STARP1-201ENST00000397973 869 ntBASIC18.72■□□□□ 0.59
AP1S1P61966 FAM8A6P-201ENST00000407496 1135 ntBASIC18.72■□□□□ 0.59
AP1S1P61966 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.72■□□□□ 0.59
AP1S1P61966 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.72■□□□□ 0.59
AP1S1P61966 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.72■□□□□ 0.59
AP1S1P61966 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.72■□□□□ 0.59
AP1S1P61966 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP1S1P61966 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
AP1S1P61966 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP1S1P61966 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.72■□□□□ 0.59
AP1S1P61966 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
AP1S1P61966 MYLKP1-201ENST00000509077 1580 ntBASIC18.72■□□□□ 0.59
AP1S1P61966 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S1P61966 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
AP1S1P61966 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.71■□□□□ 0.59
AP1S1P61966 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
AP1S1P61966 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
AP1S1P61966 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.71■□□□□ 0.59
AP1S1P61966 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.71■□□□□ 0.59
AP1S1P61966 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
AP1S1P61966 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.71■□□□□ 0.59
AP1S1P61966 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S1P61966 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
AP1S1P61966 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
AP1S1P61966 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP1S1P61966 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.7■□□□□ 0.58
AP1S1P61966 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.7■□□□□ 0.58
AP1S1P61966 RASA4DP-201ENST00000460726 1199 ntBASIC18.7■□□□□ 0.58
AP1S1P61966 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.7■□□□□ 0.58
AP1S1P61966 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.7■□□□□ 0.58
AP1S1P61966 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.7■□□□□ 0.58
AP1S1P61966 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.7■□□□□ 0.58
AP1S1P61966 AL590326.2-201ENST00000625139 305 ntBASIC18.7■□□□□ 0.58
AP1S1P61966 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.7■□□□□ 0.58
AP1S1P61966 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP1S1P61966 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
AP1S1P61966 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms