Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
EPHB3P54753 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.43■□□□□ 0.7
EPHB3P54753 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.43■□□□□ 0.7
EPHB3P54753 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
EPHB3P54753 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.43■□□□□ 0.7
EPHB3P54753 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.43■□□□□ 0.7
EPHB3P54753 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.43■□□□□ 0.7
EPHB3P54753 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
EPHB3P54753 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
EPHB3P54753 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHB3P54753 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHB3P54753 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EPHB3P54753 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.42■□□□□ 0.7
EPHB3P54753 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHB3P54753 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHB3P54753 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EPHB3P54753 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.42■□□□□ 0.7
EPHB3P54753 AC024563.2-201ENST00000603282 481 ntBASIC19.42■□□□□ 0.7
EPHB3P54753 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.42■□□□□ 0.7
EPHB3P54753 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.42■□□□□ 0.7
EPHB3P54753 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EPHB3P54753 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EPHB3P54753 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EPHB3P54753 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHB3P54753 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
EPHB3P54753 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
EPHB3P54753 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB3P54753 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.41■□□□□ 0.7
EPHB3P54753 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.41■□□□□ 0.7
EPHB3P54753 AP000593.1-201ENST00000393668 712 ntBASIC19.41■□□□□ 0.7
EPHB3P54753 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.41■□□□□ 0.7
EPHB3P54753 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB3P54753 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.41■□□□□ 0.7
EPHB3P54753 AC090616.6-201ENST00000582640 721 ntBASIC19.41■□□□□ 0.7
EPHB3P54753 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB3P54753 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB3P54753 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 KRT8P50-201ENST00000562022 1438 ntBASIC19.41■□□□□ 0.7
EPHB3P54753 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EPHB3P54753 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB3P54753 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms