Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC113404.2-201ENST00000507884 177 ntBASIC26.61■■□□□ 1.85
CLTCL1P53675 RNA5SP419-201ENST00000515908 135 ntBASIC26.61■■□□□ 1.85
CLTCL1P53675 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CLTCL1P53675 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC26.61■■□□□ 1.85
CLTCL1P53675 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.61■■□□□ 1.85
CLTCL1P53675 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CLTCL1P53675 SNAI3-AS1-205ENST00000568633 2096 ntBASIC26.61■■□□□ 1.85
CLTCL1P53675 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC26.61■■□□□ 1.85
CLTCL1P53675 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CLTCL1P53675 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLTCL1P53675 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC26.61■■□□□ 1.85
CLTCL1P53675 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.61■■□□□ 1.85
CLTCL1P53675 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC26.6■■□□□ 1.85
CLTCL1P53675 AL163051.1-201ENST00000569214 1512 ntBASIC26.6■■□□□ 1.85
CLTCL1P53675 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC26.6■■□□□ 1.85
CLTCL1P53675 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 AL022342.1-201ENST00000400363 863 ntBASIC26.6■■□□□ 1.85
CLTCL1P53675 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC26.6■■□□□ 1.85
CLTCL1P53675 GUSBP12-201ENST00000513727 720 ntBASIC26.6■■□□□ 1.85
CLTCL1P53675 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.6■■□□□ 1.85
CLTCL1P53675 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.6■■□□□ 1.85
CLTCL1P53675 AL121912.1-201ENST00000603683 238 ntBASIC26.6■■□□□ 1.85
CLTCL1P53675 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CLTCL1P53675 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC26.59■■□□□ 1.85
CLTCL1P53675 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.59■■□□□ 1.85
CLTCL1P53675 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC26.59■■□□□ 1.85
CLTCL1P53675 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLTCL1P53675 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLTCL1P53675 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.59■■□□□ 1.85
CLTCL1P53675 VENTXP7-201ENST00000475503 772 ntBASIC26.59■■□□□ 1.85
CLTCL1P53675 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
CLTCL1P53675 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.59■■□□□ 1.85
CLTCL1P53675 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC26.59■■□□□ 1.85
CLTCL1P53675 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CLTCL1P53675 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLTCL1P53675 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CLTCL1P53675 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLTCL1P53675 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC26.59■■□□□ 1.85
CLTCL1P53675 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLTCL1P53675 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.58■■□□□ 1.85
CLTCL1P53675 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CLTCL1P53675 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC26.58■■□□□ 1.85
CLTCL1P53675 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC26.58■■□□□ 1.85
CLTCL1P53675 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.58■■□□□ 1.85
CLTCL1P53675 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLTCL1P53675 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC26.58■■□□□ 1.85
CLTCL1P53675 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CLTCL1P53675 LSM5-204ENST00000409909 740 ntTSL 2 BASIC26.57■■□□□ 1.84
CLTCL1P53675 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC26.57■■□□□ 1.84
CLTCL1P53675 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.57■■□□□ 1.84
CLTCL1P53675 IGHV3-41-201ENST00000613121 348 ntBASIC26.57■■□□□ 1.84
CLTCL1P53675 CCNC-219ENST00000627680 896 ntTSL 5 BASIC26.57■■□□□ 1.84
CLTCL1P53675 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CLTCL1P53675 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CLTCL1P53675 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CLTCL1P53675 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC26.57■■□□□ 1.84
CLTCL1P53675 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CLTCL1P53675 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC26.57■■□□□ 1.84
CLTCL1P53675 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLTCL1P53675 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC26.57■■□□□ 1.84
CLTCL1P53675 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CLTCL1P53675 AC023511.2-201ENST00000618803 211 ntBASIC26.57■■□□□ 1.84
CLTCL1P53675 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC26.56■■□□□ 1.84
CLTCL1P53675 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLTCL1P53675 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLTCL1P53675 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.56■■□□□ 1.84
CLTCL1P53675 AF238378.1-201ENST00000526806 358 ntBASIC26.56■■□□□ 1.84
CLTCL1P53675 VPS51-217ENST00000639871 243 ntTSL 5 BASIC26.56■■□□□ 1.84
CLTCL1P53675 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms