Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COPAP53621 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 AC009947.2-201ENST00000444014 672 ntBASIC19.19■□□□□ 0.66
COPAP53621 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 FAM86EP-206ENST00000510506 987 ntBASIC19.19■□□□□ 0.66
COPAP53621 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.19■□□□□ 0.66
COPAP53621 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.19■□□□□ 0.66
COPAP53621 AL121956.5-201ENST00000625261 221 ntBASIC19.19■□□□□ 0.66
COPAP53621 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.19■□□□□ 0.66
COPAP53621 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
COPAP53621 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.19■□□□□ 0.66
COPAP53621 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.18■□□□□ 0.66
COPAP53621 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COPAP53621 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.18■□□□□ 0.66
COPAP53621 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.18■□□□□ 0.66
COPAP53621 NEK4P2-201ENST00000580004 1012 ntBASIC19.18■□□□□ 0.66
COPAP53621 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.18■□□□□ 0.66
COPAP53621 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COPAP53621 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPAP53621 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
COPAP53621 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COPAP53621 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPAP53621 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
COPAP53621 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.17■□□□□ 0.66
COPAP53621 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.17■□□□□ 0.66
COPAP53621 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.17■□□□□ 0.66
COPAP53621 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.17■□□□□ 0.66
COPAP53621 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.17■□□□□ 0.66
COPAP53621 TSPY21P-201ENST00000433481 731 ntBASIC19.17■□□□□ 0.66
COPAP53621 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.17■□□□□ 0.66
COPAP53621 AL671277.2-201ENST00000458060 996 ntBASIC19.17■□□□□ 0.66
COPAP53621 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.17■□□□□ 0.66
COPAP53621 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.17■□□□□ 0.66
COPAP53621 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.17■□□□□ 0.66
COPAP53621 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.17■□□□□ 0.66
COPAP53621 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.17■□□□□ 0.66
COPAP53621 AP000550.4-202ENST00000639755 178 ntBASIC19.17■□□□□ 0.66
COPAP53621 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPAP53621 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.17■□□□□ 0.66
COPAP53621 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPAP53621 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPAP53621 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms