Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.43■□□□□ 0.38
EFNA3P52797 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNA3P52797 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EFNA3P52797 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNA3P52797 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
EFNA3P52797 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFNA3P52797 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 LINC01311-201ENST00000565162 1445 ntBASIC17.42■□□□□ 0.38
EFNA3P52797 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.42■□□□□ 0.38
EFNA3P52797 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.42■□□□□ 0.38
EFNA3P52797 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 AC104390.1-201ENST00000555663 520 ntBASIC17.42■□□□□ 0.38
EFNA3P52797 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.42■□□□□ 0.38
EFNA3P52797 MIR3917-201ENST00000580971 93 ntBASIC17.42■□□□□ 0.38
EFNA3P52797 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
EFNA3P52797 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.42■□□□□ 0.38
EFNA3P52797 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFNA3P52797 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 AL499627.1-201ENST00000569373 2188 ntBASIC17.42■□□□□ 0.38
EFNA3P52797 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EFNA3P52797 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNA3P52797 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNA3P52797 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNA3P52797 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.41■□□□□ 0.38
EFNA3P52797 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFNA3P52797 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 AC034236.2-201ENST00000606662 1610 ntBASIC17.41■□□□□ 0.38
EFNA3P52797 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNA3P52797 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNA3P52797 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.41■□□□□ 0.38
EFNA3P52797 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNA3P52797 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.41■□□□□ 0.38
EFNA3P52797 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.41■□□□□ 0.38
EFNA3P52797 AC010240.3-201ENST00000607688 395 ntBASIC17.41■□□□□ 0.38
EFNA3P52797 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFNA3P52797 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EFNA3P52797 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNA3P52797 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNA3P52797 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EFNA3P52797 AC099343.3-201ENST00000605834 2503 ntBASIC17.41■□□□□ 0.38
EFNA3P52797 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNA3P52797 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
EFNA3P52797 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
EFNA3P52797 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
EFNA3P52797 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.4■□□□□ 0.38
EFNA3P52797 KRT8P50-201ENST00000562022 1438 ntBASIC17.4■□□□□ 0.38
EFNA3P52797 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
EFNA3P52797 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 PCED1CP-201ENST00000419887 785 ntBASIC17.4■□□□□ 0.38
EFNA3P52797 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.4■□□□□ 0.38
EFNA3P52797 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.4■□□□□ 0.38
EFNA3P52797 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.4■□□□□ 0.38
EFNA3P52797 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.4■□□□□ 0.38
EFNA3P52797 ZNF444P1-201ENST00000559497 298 ntBASIC17.4■□□□□ 0.38
EFNA3P52797 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.4■□□□□ 0.38
EFNA3P52797 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EFNA3P52797 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.4■□□□□ 0.38
EFNA3P52797 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNA3P52797 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms