Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.44■□□□□ 0.38
SMSP52788 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.44■□□□□ 0.38
SMSP52788 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SMSP52788 AK4P3-201ENST00000418260 669 ntBASIC17.44■□□□□ 0.38
SMSP52788 TUBB8P6-201ENST00000436895 1288 ntBASIC17.44■□□□□ 0.38
SMSP52788 YBX1P10-201ENST00000444752 975 ntBASIC17.44■□□□□ 0.38
SMSP52788 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.44■□□□□ 0.38
SMSP52788 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.44■□□□□ 0.38
SMSP52788 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SMSP52788 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SMSP52788 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 AL512353.2-201ENST00000448759 1962 ntBASIC17.44■□□□□ 0.38
SMSP52788 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.44■□□□□ 0.38
SMSP52788 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMSP52788 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 WWOX-216ENST00000569818 525 ntBASIC17.43■□□□□ 0.38
SMSP52788 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.43■□□□□ 0.38
SMSP52788 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.43■□□□□ 0.38
SMSP52788 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SMSP52788 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.43■□□□□ 0.38
SMSP52788 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMSP52788 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMSP52788 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.42■□□□□ 0.38
SMSP52788 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMSP52788 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMSP52788 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.42■□□□□ 0.38
SMSP52788 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMSP52788 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SMSP52788 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMSP52788 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.42■□□□□ 0.38
SMSP52788 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.42■□□□□ 0.38
SMSP52788 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMSP52788 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.42■□□□□ 0.38
SMSP52788 MESTP1-201ENST00000404287 994 ntBASIC17.42■□□□□ 0.38
SMSP52788 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.42■□□□□ 0.38
SMSP52788 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.42■□□□□ 0.38
SMSP52788 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.42■□□□□ 0.38
SMSP52788 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.42■□□□□ 0.38
SMSP52788 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.42■□□□□ 0.38
SMSP52788 AC091076.1-201ENST00000610741 619 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms