Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB28P51157 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB28P51157 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB28P51157 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 AC092647.4-201ENST00000457211 535 ntBASIC17.96■□□□□ 0.47
RAB28P51157 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 AC034232.1-201ENST00000506026 1064 ntBASIC17.96■□□□□ 0.47
RAB28P51157 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB28P51157 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 AC022616.7-201ENST00000525383 220 ntBASIC17.96■□□□□ 0.47
RAB28P51157 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 LINC01238-205ENST00000567549 1107 ntBASIC17.96■□□□□ 0.47
RAB28P51157 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.96■□□□□ 0.47
RAB28P51157 MIR3180-4-201ENST00000582223 153 ntBASIC17.96■□□□□ 0.47
RAB28P51157 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB28P51157 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB28P51157 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB28P51157 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
RAB28P51157 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB28P51157 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB28P51157 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.95■□□□□ 0.46
RAB28P51157 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB28P51157 AC010240.3-201ENST00000607688 395 ntBASIC17.95■□□□□ 0.46
RAB28P51157 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAB28P51157 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB28P51157 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RAB28P51157 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB28P51157 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB28P51157 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB28P51157 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RAB28P51157 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB28P51157 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RAB28P51157 FAM8A6P-201ENST00000407496 1135 ntBASIC17.94■□□□□ 0.46
RAB28P51157 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB28P51157 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB28P51157 AC009065.1-201ENST00000564055 1225 ntBASIC17.94■□□□□ 0.46
RAB28P51157 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB28P51157 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RAB28P51157 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB28P51157 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RAB28P51157 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RAB28P51157 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 AL499627.1-201ENST00000569373 2188 ntBASIC17.94■□□□□ 0.46
RAB28P51157 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAB28P51157 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB28P51157 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB28P51157 AC093503.3-201ENST00000624917 2352 ntBASIC17.94■□□□□ 0.46
RAB28P51157 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms