Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PCP4P48539 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC12.84□□□□□ -0.35
PCP4P48539 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 CICP8-201ENST00000455800 2813 ntBASIC12.84□□□□□ -0.35
PCP4P48539 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.84□□□□□ -0.35
PCP4P48539 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.84□□□□□ -0.35
PCP4P48539 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.84□□□□□ -0.35
PCP4P48539 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.84□□□□□ -0.35
PCP4P48539 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 AC093010.1-201ENST00000473625 1624 ntBASIC12.84□□□□□ -0.35
PCP4P48539 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC12.84□□□□□ -0.35
PCP4P48539 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PCP4P48539 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
PCP4P48539 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.84□□□□□ -0.35
PCP4P48539 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCP4P48539 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PCP4P48539 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PCP4P48539 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
PCP4P48539 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.83□□□□□ -0.36
PCP4P48539 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PCP4P48539 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PCP4P48539 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PCP4P48539 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.83□□□□□ -0.36
PCP4P48539 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.83□□□□□ -0.36
PCP4P48539 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
PCP4P48539 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.83□□□□□ -0.36
PCP4P48539 AC005840.4-201ENST00000541242 2494 ntBASIC12.83□□□□□ -0.36
PCP4P48539 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PCP4P48539 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCP4P48539 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PCP4P48539 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PCP4P48539 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PCP4P48539 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
PCP4P48539 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 AC067750.1-201ENST00000608826 6545 ntBASIC12.82□□□□□ -0.36
PCP4P48539 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 LINC00602-201ENST00000629776 2065 ntBASIC12.82□□□□□ -0.36
PCP4P48539 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCP4P48539 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
PCP4P48539 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PCP4P48539 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms