Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC1A1P43005 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SLC1A1P43005 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC1A1P43005 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SLC1A1P43005 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC1A1P43005 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC1A1P43005 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC1A1P43005 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 TSPY20P-201ENST00000450910 630 ntBASIC19.5■□□□□ 0.71
SLC1A1P43005 CA15P1-201ENST00000481698 905 ntBASIC19.5■□□□□ 0.71
SLC1A1P43005 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC1A1P43005 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC1A1P43005 AP001412.1-201ENST00000608405 714 ntBASIC19.5■□□□□ 0.71
SLC1A1P43005 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC1A1P43005 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC1A1P43005 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC1A1P43005 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.5■□□□□ 0.71
SLC1A1P43005 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC1A1P43005 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC1A1P43005 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC1A1P43005 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC1A1P43005 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC1A1P43005 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC1A1P43005 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC1A1P43005 AL023284.2-201ENST00000405850 579 ntBASIC19.49■□□□□ 0.71
SLC1A1P43005 MFAP1P1-201ENST00000442257 1255 ntBASIC19.49■□□□□ 0.71
SLC1A1P43005 MCCD1P1-208ENST00000445732 328 ntBASIC19.49■□□□□ 0.71
SLC1A1P43005 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC1A1P43005 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC1A1P43005 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC1A1P43005 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC1A1P43005 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC1A1P43005 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC1A1P43005 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 PRORSD1P-201ENST00000295112 541 ntBASIC19.48■□□□□ 0.71
SLC1A1P43005 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 UBE2SP1-201ENST00000450587 669 ntBASIC19.48■□□□□ 0.71
SLC1A1P43005 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC1A1P43005 AC142381.4-202ENST00000563973 229 ntBASIC19.48■□□□□ 0.71
SLC1A1P43005 SLC25A1P4-201ENST00000567977 778 ntBASIC19.48■□□□□ 0.71
SLC1A1P43005 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC1A1P43005 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC1A1P43005 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 LETM1P2-201ENST00000597330 2178 ntBASIC19.48■□□□□ 0.71
SLC1A1P43005 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SLC1A1P43005 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 AC135776.1-201ENST00000319817 2481 ntBASIC19.48■□□□□ 0.71
SLC1A1P43005 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC1A1P43005 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC1A1P43005 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC1A1P43005 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC1A1P43005 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC1A1P43005 AC026471.1-201ENST00000564629 3026 ntBASIC19.47■□□□□ 0.71
SLC1A1P43005 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms