Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
COL15A1P39059 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL15A1P39059 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.57■■□□□ 1.36
COL15A1P39059 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
COL15A1P39059 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.57■■□□□ 1.36
COL15A1P39059 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL15A1P39059 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.57■■□□□ 1.36
COL15A1P39059 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.57■■□□□ 1.36
COL15A1P39059 AC005332.7-201ENST00000614046 2005 ntBASIC23.57■■□□□ 1.36
COL15A1P39059 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
COL15A1P39059 NSUN5P1-202ENST00000421140 1535 ntBASIC23.57■■□□□ 1.36
COL15A1P39059 NSUN5P2-203ENST00000457352 1529 ntBASIC23.57■■□□□ 1.36
COL15A1P39059 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.57■■□□□ 1.36
COL15A1P39059 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
COL15A1P39059 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL15A1P39059 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL15A1P39059 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL15A1P39059 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.57■■□□□ 1.36
COL15A1P39059 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.57■■□□□ 1.36
COL15A1P39059 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.56■■□□□ 1.36
COL15A1P39059 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COL15A1P39059 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.56■■□□□ 1.36
COL15A1P39059 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 SAPCD2P3-201ENST00000455031 850 ntBASIC23.56■■□□□ 1.36
COL15A1P39059 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 AC091607.1-201ENST00000490318 1060 ntBASIC23.56■■□□□ 1.36
COL15A1P39059 AC079776.4-201ENST00000511039 504 ntBASIC23.56■■□□□ 1.36
COL15A1P39059 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.56■■□□□ 1.36
COL15A1P39059 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.56■■□□□ 1.36
COL15A1P39059 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.56■■□□□ 1.36
COL15A1P39059 AC024563.2-201ENST00000603282 481 ntBASIC23.56■■□□□ 1.36
COL15A1P39059 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 AC124864.1-201ENST00000623408 392 ntBASIC23.56■■□□□ 1.36
COL15A1P39059 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL15A1P39059 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.56■■□□□ 1.36
COL15A1P39059 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.56■■□□□ 1.36
COL15A1P39059 HLA-A-201ENST00000376802 1334 ntBASIC23.56■■□□□ 1.36
COL15A1P39059 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL15A1P39059 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.55■■□□□ 1.36
COL15A1P39059 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
COL15A1P39059 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.55■■□□□ 1.36
COL15A1P39059 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.55■■□□□ 1.36
COL15A1P39059 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.55■■□□□ 1.36
COL15A1P39059 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.55■■□□□ 1.36
COL15A1P39059 AL671883.3-201ENST00000603274 991 ntBASIC23.55■■□□□ 1.36
COL15A1P39059 REXO1L6P-202ENST00000619970 1078 ntBASIC23.55■■□□□ 1.36
COL15A1P39059 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
COL15A1P39059 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.55■■□□□ 1.36
COL15A1P39059 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL15A1P39059 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
COL15A1P39059 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 NUS1P2-201ENST00000417358 873 ntBASIC23.54■■□□□ 1.36
COL15A1P39059 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.54■■□□□ 1.36
COL15A1P39059 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
COL15A1P39059 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.54■■□□□ 1.36
COL15A1P39059 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.54■■□□□ 1.36
COL15A1P39059 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.54■■□□□ 1.36
COL15A1P39059 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
COL15A1P39059 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.54■■□□□ 1.36
COL15A1P39059 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.54■■□□□ 1.36
COL15A1P39059 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL15A1P39059 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
COL15A1P39059 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
COL15A1P39059 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.53■■□□□ 1.36
COL15A1P39059 GUSBP12-201ENST00000513727 720 ntBASIC23.53■■□□□ 1.36
COL15A1P39059 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.53■■□□□ 1.36
COL15A1P39059 GPALPP1-207ENST00000611650 899 ntBASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms