Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SNCAP37840 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNCAP37840 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNCAP37840 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNCAP37840 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNCAP37840 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.33■□□□□ 0.04
SNCAP37840 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.33■□□□□ 0.04
SNCAP37840 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.33■□□□□ 0.04
SNCAP37840 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNCAP37840 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNCAP37840 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SNCAP37840 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNCAP37840 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNCAP37840 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNCAP37840 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.32■□□□□ 0.04
SNCAP37840 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.32■□□□□ 0.04
SNCAP37840 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.32■□□□□ 0.04
SNCAP37840 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCAP37840 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 AC084018.2-201ENST00000613093 2607 ntBASIC15.32■□□□□ 0.04
SNCAP37840 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.32■□□□□ 0.04
SNCAP37840 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.32■□□□□ 0.04
SNCAP37840 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCAP37840 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.32■□□□□ 0.04
SNCAP37840 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SNCAP37840 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 IRX1P1-201ENST00000438849 1838 ntBASIC15.31■□□□□ 0.04
SNCAP37840 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SNCAP37840 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNCAP37840 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
SNCAP37840 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.31■□□□□ 0.04
SNCAP37840 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.31■□□□□ 0.04
SNCAP37840 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.31■□□□□ 0.04
SNCAP37840 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 CROCCP5-201ENST00000436658 830 ntBASIC15.31■□□□□ 0.04
SNCAP37840 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.31■□□□□ 0.04
SNCAP37840 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SNCAP37840 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 AC104417.2-201ENST00000562989 1793 ntBASIC15.31■□□□□ 0.04
SNCAP37840 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.31■□□□□ 0.04
SNCAP37840 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCAP37840 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCAP37840 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNCAP37840 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCAP37840 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.3■□□□□ 0.04
SNCAP37840 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms