Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
KRT2P35908 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KRT2P35908 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KRT2P35908 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 KRT18P22-201ENST00000402024 1347 ntBASIC21.32■■□□□ 1
KRT2P35908 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
KRT2P35908 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.32■■□□□ 1
KRT2P35908 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 AP000593.1-201ENST00000393668 712 ntBASIC21.32■■□□□ 1
KRT2P35908 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.32■■□□□ 1
KRT2P35908 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.32■■□□□ 1
KRT2P35908 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.32■■□□□ 1
KRT2P35908 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.32■■□□□ 1
KRT2P35908 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.32■■□□□ 1
KRT2P35908 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
KRT2P35908 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.32■■□□□ 1
KRT2P35908 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT2P35908 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.31■■□□□ 1
KRT2P35908 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
KRT2P35908 KRT8P50-201ENST00000562022 1438 ntBASIC21.31■■□□□ 1
KRT2P35908 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.31■■□□□ 1
KRT2P35908 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 KRT18P23-201ENST00000435622 1283 ntBASIC21.31■■□□□ 1
KRT2P35908 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.31■■□□□ 1
KRT2P35908 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.31■■□□□ 1
KRT2P35908 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KRT2P35908 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.31■■□□□ 1
KRT2P35908 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
KRT2P35908 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KRT2P35908 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.31■■□□□ 1
KRT2P35908 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT2P35908 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.3■■□□□ 1
KRT2P35908 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
KRT2P35908 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.3■■□□□ 1
KRT2P35908 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
KRT2P35908 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
KRT2P35908 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.3■■□□□ 1
KRT2P35908 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.3■■□□□ 1
KRT2P35908 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.3■■□□□ 1
KRT2P35908 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.3■■□□□ 1
KRT2P35908 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.3■■□□□ 1
KRT2P35908 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.3■■□□□ 1
KRT2P35908 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.3■■□□□ 1
KRT2P35908 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.3■■□□□ 1
KRT2P35908 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.3■■□□□ 1
KRT2P35908 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.3■■□□□ 1
KRT2P35908 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT2P35908 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT2P35908 HOXB1-202ENST00000577092 1414 ntBASIC21.29■■□□□ 1
KRT2P35908 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.29■■□□□ 1
KRT2P35908 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
KRT2P35908 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT2P35908 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.29■■□□□ 1
KRT2P35908 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT2P35908 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT2P35908 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT2P35908 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms