Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MMP8P22894 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP8P22894 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP8P22894 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.57■□□□□ 0.72
MMP8P22894 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 AC128688.1-201ENST00000487626 519 ntBASIC19.57■□□□□ 0.72
MMP8P22894 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP8P22894 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
MMP8P22894 FAM87A-204ENST00000613235 858 ntBASIC19.57■□□□□ 0.72
MMP8P22894 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
MMP8P22894 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP8P22894 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP8P22894 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MMP8P22894 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 AL162741.1-201ENST00000565563 1558 ntBASIC19.57■□□□□ 0.72
MMP8P22894 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP8P22894 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MMP8P22894 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.56■□□□□ 0.72
MMP8P22894 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.56■□□□□ 0.72
MMP8P22894 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.56■□□□□ 0.72
MMP8P22894 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 KRT8P7-201ENST00000533003 1432 ntBASIC19.56■□□□□ 0.72
MMP8P22894 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MMP8P22894 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP8P22894 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.56■□□□□ 0.72
MMP8P22894 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP8P22894 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
MMP8P22894 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MMP8P22894 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP8P22894 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 AL390961.4-201ENST00000623958 2535 ntBASIC19.55■□□□□ 0.72
MMP8P22894 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP8P22894 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP8P22894 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP8P22894 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
MMP8P22894 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP8P22894 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP8P22894 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP8P22894 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP8P22894 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP8P22894 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP8P22894 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP8P22894 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MMP8P22894 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP8P22894 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MMP8P22894 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP8P22894 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP8P22894 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
MMP8P22894 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MMP8P22894 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP8P22894 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP8P22894 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP8P22894 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP8P22894 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP8P22894 ECEL1P2-202ENST00000465689 757 ntBASIC19.54■□□□□ 0.72
MMP8P22894 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms