Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB4AP20338 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAB4AP20338 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 AL354811.1-201ENST00000610286 706 ntBASIC14.26□□□□□ -0.13
RAB4AP20338 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAB4AP20338 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
RAB4AP20338 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 ABALON-201ENST00000629058 1903 ntBASIC14.25□□□□□ -0.13
RAB4AP20338 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB4AP20338 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB4AP20338 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB4AP20338 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB4AP20338 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 CDV3P1-201ENST00000471403 739 ntBASIC14.25□□□□□ -0.13
RAB4AP20338 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 CCDC92B-201ENST00000575506 885 ntBASIC14.25□□□□□ -0.13
RAB4AP20338 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB4AP20338 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 PTBP1P-201ENST00000554374 1601 ntBASIC14.25□□□□□ -0.13
RAB4AP20338 AL662844.4-201ENST00000606367 2838 ntBASIC14.25□□□□□ -0.13
RAB4AP20338 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 AD000864.1-201ENST00000624076 2295 ntBASIC14.25□□□□□ -0.13
RAB4AP20338 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RAB4AP20338 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB4AP20338 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB4AP20338 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB4AP20338 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB4AP20338 ESPNP-201ENST00000270691 2015 ntBASIC14.24□□□□□ -0.13
RAB4AP20338 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB4AP20338 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB4AP20338 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB4AP20338 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB4AP20338 AC097381.1-201ENST00000429019 1296 ntBASIC14.24□□□□□ -0.13
RAB4AP20338 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB4AP20338 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB4AP20338 KRT18P20-201ENST00000548986 1279 ntBASIC14.24□□□□□ -0.13
RAB4AP20338 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB4AP20338 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.24□□□□□ -0.13
RAB4AP20338 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB4AP20338 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB4AP20338 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RAB4AP20338 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms