Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 AC112777.1-201ENST00000540175 1423 ntBASIC16.35■□□□□ 0.21
UBCP0CG48 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBCP0CG48 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBCP0CG48 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
UBCP0CG48 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.34■□□□□ 0.21
UBCP0CG48 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
UBCP0CG48 NIFKP9-201ENST00000419265 221 ntBASIC16.34■□□□□ 0.21
UBCP0CG48 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.34■□□□□ 0.21
UBCP0CG48 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
UBCP0CG48 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.34■□□□□ 0.21
UBCP0CG48 AC233263.1-201ENST00000578059 224 ntBASIC16.34■□□□□ 0.21
UBCP0CG48 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 AC092666.2-201ENST00000613287 246 ntBASIC16.34■□□□□ 0.21
UBCP0CG48 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.34■□□□□ 0.21
UBCP0CG48 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBCP0CG48 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
UBCP0CG48 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.34■□□□□ 0.21
UBCP0CG48 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBCP0CG48 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBCP0CG48 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBCP0CG48 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.33■□□□□ 0.21
UBCP0CG48 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.33■□□□□ 0.21
UBCP0CG48 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBCP0CG48 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBCP0CG48 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.33■□□□□ 0.21
UBCP0CG48 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 AC133681.1-201ENST00000465482 601 ntBASIC16.33■□□□□ 0.2
UBCP0CG48 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.33■□□□□ 0.2
UBCP0CG48 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
UBCP0CG48 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.33■□□□□ 0.2
UBCP0CG48 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.33■□□□□ 0.2
UBCP0CG48 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UBCP0CG48 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBCP0CG48 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.33■□□□□ 0.2
UBCP0CG48 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
UBCP0CG48 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.33■□□□□ 0.2
UBCP0CG48 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
UBCP0CG48 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.33■□□□□ 0.2
UBCP0CG48 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.33■□□□□ 0.2
UBCP0CG48 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.33■□□□□ 0.2
UBCP0CG48 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBCP0CG48 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms