Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN1P07384 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 KRT18P22-201ENST00000402024 1347 ntBASIC18.33■□□□□ 0.53
CAPN1P07384 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPN1P07384 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN1P07384 AC007613.1-201ENST00000572811 2597 ntBASIC18.33■□□□□ 0.52
CAPN1P07384 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPN1P07384 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN1P07384 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.33■□□□□ 0.52
CAPN1P07384 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPN1P07384 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 RCC2P6-201ENST00000526625 1557 ntBASIC18.33■□□□□ 0.52
CAPN1P07384 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPN1P07384 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN1P07384 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CAPN1P07384 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN1P07384 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPN1P07384 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 AC113347.1-201ENST00000413321 391 ntBASIC18.32■□□□□ 0.52
CAPN1P07384 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 AC097488.1-201ENST00000507834 756 ntBASIC18.32■□□□□ 0.52
CAPN1P07384 AP000692.2-201ENST00000608391 879 ntBASIC18.32■□□□□ 0.52
CAPN1P07384 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CAPN1P07384 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CAPN1P07384 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPN1P07384 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN1P07384 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 AC073508.3-201ENST00000619697 1419 ntBASIC18.32■□□□□ 0.52
CAPN1P07384 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN1P07384 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CAPN1P07384 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CAPN1P07384 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPN1P07384 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN1P07384 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN1P07384 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPN1P07384 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CAPN1P07384 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN1P07384 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPN1P07384 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN1P07384 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN1P07384 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN1P07384 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms