Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
TPM3P06753 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TPM3P06753 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TPM3P06753 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 AC099398.1-201ENST00000567919 2776 ntBASIC20.88■□□□□ 0.93
TPM3P06753 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.87■□□□□ 0.93
TPM3P06753 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TPM3P06753 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.87■□□□□ 0.93
TPM3P06753 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TPM3P06753 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM3P06753 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM3P06753 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.86■□□□□ 0.93
TPM3P06753 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM3P06753 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TPM3P06753 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.86■□□□□ 0.93
TPM3P06753 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM3P06753 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM3P06753 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM3P06753 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TPM3P06753 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TPM3P06753 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TPM3P06753 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM3P06753 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 AC092368.3-202ENST00000574180 1591 ntBASIC20.85■□□□□ 0.93
TPM3P06753 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 AL121829.2-201ENST00000620908 328 ntBASIC20.85■□□□□ 0.93
TPM3P06753 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TPM3P06753 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM3P06753 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.85■□□□□ 0.93
TPM3P06753 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM3P06753 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TPM3P06753 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms