Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 IGHV3-47-201ENST00000425060 335 ntBASIC20.24■□□□□ 0.83
CHRNA1P02708 AP000347.1-202ENST00000435868 847 ntBASIC20.24■□□□□ 0.83
CHRNA1P02708 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA1P02708 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRNA1P02708 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CHRNA1P02708 AC138894.3-201ENST00000603787 634 ntBASIC20.24■□□□□ 0.83
CHRNA1P02708 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRNA1P02708 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.24■□□□□ 0.83
CHRNA1P02708 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA1P02708 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRNA1P02708 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CHRNA1P02708 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA1P02708 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRNA1P02708 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA1P02708 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA1P02708 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA1P02708 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.23■□□□□ 0.83
CHRNA1P02708 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHRNA1P02708 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.23■□□□□ 0.83
CHRNA1P02708 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHRNA1P02708 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.23■□□□□ 0.83
CHRNA1P02708 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA1P02708 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.23■□□□□ 0.83
CHRNA1P02708 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.23■□□□□ 0.83
CHRNA1P02708 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 AL353692.3-201ENST00000407031 1396 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.22■□□□□ 0.83
CHRNA1P02708 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.22■□□□□ 0.83
CHRNA1P02708 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA1P02708 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA1P02708 AC091607.1-201ENST00000490318 1060 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 GUSBP12-201ENST00000513727 720 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA1P02708 AL160237.2-201ENST00000556165 472 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA1P02708 AP005901.3-202ENST00000581653 237 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 Z69720.1-201ENST00000601483 472 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 AC099336.1-202ENST00000602961 463 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.22■□□□□ 0.83
CHRNA1P02708 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHRNA1P02708 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHRNA1P02708 KRT89P-201ENST00000620027 1478 ntBASIC20.22■□□□□ 0.83
CHRNA1P02708 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.22■□□□□ 0.83
CHRNA1P02708 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA1P02708 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRNA1P02708 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.21■□□□□ 0.83
CHRNA1P02708 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA1P02708 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRNA1P02708 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA1P02708 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.21■□□□□ 0.83
CHRNA1P02708 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CHRNA1P02708 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CHRNA1P02708 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA1P02708 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.21■□□□□ 0.83
CHRNA1P02708 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 KRT18P41-201ENST00000518924 1277 ntBASIC20.21■□□□□ 0.83
CHRNA1P02708 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 AC009065.1-201ENST00000564055 1225 ntBASIC20.21■□□□□ 0.83
CHRNA1P02708 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRNA1P02708 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRNA1P02708 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA1P02708 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA1P02708 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.2■□□□□ 0.83
CHRNA1P02708 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRNA1P02708 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA1P02708 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA1P02708 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA1P02708 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRNA1P02708 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRNA1P02708 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHRNA1P02708 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.2■□□□□ 0.82
CHRNA1P02708 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.2■□□□□ 0.82
CHRNA1P02708 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CHRNA1P02708 LINC01711-201ENST00000598340 967 ntBASIC20.2■□□□□ 0.82
CHRNA1P02708 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.2■□□□□ 0.82
CHRNA1P02708 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA1P02708 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRNA1P02708 AL163051.1-201ENST00000569214 1512 ntBASIC20.2■□□□□ 0.82
CHRNA1P02708 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms