Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LTAP01374 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.02□□□□□ -0.16
LTAP01374 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.02□□□□□ -0.16
LTAP01374 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LTAP01374 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LTAP01374 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.02□□□□□ -0.16
LTAP01374 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LTAP01374 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.02□□□□□ -0.16
LTAP01374 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTAP01374 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.02□□□□□ -0.17
LTAP01374 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 AC087623.3-201ENST00000607047 1098 ntBASIC14.02□□□□□ -0.17
LTAP01374 HLA-A-209ENST00000638375 975 ntBASIC14.02□□□□□ -0.17
LTAP01374 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.02□□□□□ -0.17
LTAP01374 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LTAP01374 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTAP01374 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.02□□□□□ -0.17
LTAP01374 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 AL357033.4-201ENST00000617703 1807 ntBASIC14.01□□□□□ -0.17
LTAP01374 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 AC099398.1-201ENST00000567919 2776 ntBASIC14.01□□□□□ -0.17
LTAP01374 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 DUSP5P2-201ENST00000426873 1033 ntBASIC14.01□□□□□ -0.17
LTAP01374 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.01□□□□□ -0.17
LTAP01374 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.01□□□□□ -0.17
LTAP01374 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.01□□□□□ -0.17
LTAP01374 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LTAP01374 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTAP01374 AC092368.3-202ENST00000574180 1591 ntBASIC14□□□□□ -0.17
LTAP01374 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTAP01374 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14□□□□□ -0.17
LTAP01374 OR6D1P-202ENST00000641007 5290 ntBASIC14□□□□□ -0.17
LTAP01374 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTAP01374 KRT8P41-201ENST00000533985 1514 ntBASIC14□□□□□ -0.17
LTAP01374 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms