Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.73■□□□□ 0.59
VAPBO95292 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.73■□□□□ 0.59
VAPBO95292 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
VAPBO95292 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.73■□□□□ 0.59
VAPBO95292 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.73■□□□□ 0.59
VAPBO95292 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.73■□□□□ 0.59
VAPBO95292 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
VAPBO95292 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
VAPBO95292 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.73■□□□□ 0.59
VAPBO95292 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAPBO95292 AC008556.1-201ENST00000610908 2040 ntBASIC18.73■□□□□ 0.59
VAPBO95292 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.72■□□□□ 0.59
VAPBO95292 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.72■□□□□ 0.59
VAPBO95292 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.72■□□□□ 0.59
VAPBO95292 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VAPBO95292 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.72■□□□□ 0.59
VAPBO95292 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.72■□□□□ 0.59
VAPBO95292 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 AC008550.1-201ENST00000511500 884 ntBASIC18.72■□□□□ 0.59
VAPBO95292 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.72■□□□□ 0.59
VAPBO95292 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.72■□□□□ 0.59
VAPBO95292 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
VAPBO95292 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VAPBO95292 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.72■□□□□ 0.59
VAPBO95292 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.72■□□□□ 0.59
VAPBO95292 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
VAPBO95292 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.71■□□□□ 0.59
VAPBO95292 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VAPBO95292 AL390961.4-201ENST00000623958 2535 ntBASIC18.71■□□□□ 0.59
VAPBO95292 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.71■□□□□ 0.59
VAPBO95292 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VAPBO95292 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 AL109659.2-201ENST00000606809 1674 ntBASIC18.71■□□□□ 0.59
VAPBO95292 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
VAPBO95292 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.71■□□□□ 0.59
VAPBO95292 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.71■□□□□ 0.59
VAPBO95292 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.71■□□□□ 0.59
VAPBO95292 AP003071.4-201ENST00000562276 1284 ntBASIC18.71■□□□□ 0.59
VAPBO95292 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.71■□□□□ 0.59
VAPBO95292 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.71■□□□□ 0.59
VAPBO95292 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VAPBO95292 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
VAPBO95292 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
VAPBO95292 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.71■□□□□ 0.59
VAPBO95292 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
VAPBO95292 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
VAPBO95292 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.7■□□□□ 0.58
VAPBO95292 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.7■□□□□ 0.58
VAPBO95292 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VAPBO95292 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.7■□□□□ 0.58
VAPBO95292 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.7■□□□□ 0.58
VAPBO95292 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.7■□□□□ 0.58
VAPBO95292 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.7■□□□□ 0.58
VAPBO95292 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.7■□□□□ 0.58
VAPBO95292 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.7■□□□□ 0.58
VAPBO95292 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VAPBO95292 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VAPBO95292 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms