Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 YBX1P10-201ENST00000444752 975 ntBASIC15.24■□□□□ 0.03
SCAF4O95104 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
SCAF4O95104 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.24■□□□□ 0.03
SCAF4O95104 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCAF4O95104 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SCAF4O95104 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SCAF4O95104 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAF4O95104 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.23■□□□□ 0.03
SCAF4O95104 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.23■□□□□ 0.03
SCAF4O95104 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 KRT18P6-201ENST00000555540 1265 ntBASIC15.23■□□□□ 0.03
SCAF4O95104 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 MYC-209ENST00000641252 345 ntBASIC15.23■□□□□ 0.03
SCAF4O95104 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAF4O95104 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SCAF4O95104 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SCAF4O95104 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SCAF4O95104 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms