Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PCDHA1-201ENST00000378133 2726 ntBASIC16.25■□□□□ 0.19
UPK1BO75841 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 AC006116.8-202ENST00000587620 1550 ntBASIC16.25■□□□□ 0.19
UPK1BO75841 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK1BO75841 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UPK1BO75841 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
UPK1BO75841 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UPK1BO75841 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UPK1BO75841 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UPK1BO75841 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1BO75841 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
UPK1BO75841 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK1BO75841 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1BO75841 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1BO75841 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1BO75841 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
UPK1BO75841 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UPK1BO75841 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
UPK1BO75841 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
UPK1BO75841 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms