Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF11O60813 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF11O60813 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEF11O60813 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF11O60813 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF11O60813 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEF11O60813 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF11O60813 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF11O60813 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
PRAMEF11O60813 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 DUX4L26-201ENST00000489078 1255 ntBASIC18.86■□□□□ 0.61
PRAMEF11O60813 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF11O60813 MIR3917-201ENST00000580971 93 ntBASIC18.86■□□□□ 0.61
PRAMEF11O60813 WIZP1-201ENST00000531444 2299 ntBASIC18.86■□□□□ 0.61
PRAMEF11O60813 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF11O60813 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 AL163051.1-201ENST00000569214 1512 ntBASIC18.85■□□□□ 0.61
PRAMEF11O60813 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 AC126763.1-201ENST00000552015 2118 ntBASIC18.85■□□□□ 0.61
PRAMEF11O60813 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF11O60813 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF11O60813 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.84■□□□□ 0.61
PRAMEF11O60813 AC063952.2-201ENST00000498792 1227 ntBASIC18.84■□□□□ 0.61
PRAMEF11O60813 AC034232.1-201ENST00000506026 1064 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms