Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 RN7SL850P-201ENST00000579959 291 ntBASIC17.41■□□□□ 0.38
HCN1O60741 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.41■□□□□ 0.38
HCN1O60741 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.41■□□□□ 0.38
HCN1O60741 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HCN1O60741 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 IRX1P1-201ENST00000438849 1838 ntBASIC17.4■□□□□ 0.38
HCN1O60741 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HCN1O60741 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 SLC25A1P2-201ENST00000430693 912 ntBASIC17.4■□□□□ 0.38
HCN1O60741 CCR12P-201ENST00000446203 998 ntBASIC17.4■□□□□ 0.38
HCN1O60741 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.4■□□□□ 0.38
HCN1O60741 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 AC116562.4-202ENST00000641738 218 ntBASIC17.4■□□□□ 0.38
HCN1O60741 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HCN1O60741 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.4■□□□□ 0.38
HCN1O60741 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HCN1O60741 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCN1O60741 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HCN1O60741 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HCN1O60741 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.39■□□□□ 0.38
HCN1O60741 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HCN1O60741 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.39■□□□□ 0.38
HCN1O60741 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.39■□□□□ 0.37
HCN1O60741 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 TERF1P1-201ENST00000311003 1181 ntBASIC17.39■□□□□ 0.37
HCN1O60741 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.39■□□□□ 0.37
HCN1O60741 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.39■□□□□ 0.37
HCN1O60741 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
HCN1O60741 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.39■□□□□ 0.37
HCN1O60741 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
HCN1O60741 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.39■□□□□ 0.37
HCN1O60741 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.37
HCN1O60741 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.39■□□□□ 0.37
HCN1O60741 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HCN1O60741 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCN1O60741 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
HCN1O60741 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HCN1O60741 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms