Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SSNA1O43805 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SSNA1O43805 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.88■□□□□ 0.13
SSNA1O43805 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSNA1O43805 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.88■□□□□ 0.13
SSNA1O43805 AC008764.7-201ENST00000593779 1081 ntBASIC15.88■□□□□ 0.13
SSNA1O43805 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.88■□□□□ 0.13
SSNA1O43805 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.88■□□□□ 0.13
SSNA1O43805 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SSNA1O43805 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.87■□□□□ 0.13
SSNA1O43805 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.87■□□□□ 0.13
SSNA1O43805 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SSNA1O43805 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSNA1O43805 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SSNA1O43805 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.87■□□□□ 0.13
SSNA1O43805 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 AP001160.3-201ENST00000601484 763 ntBASIC15.87■□□□□ 0.13
SSNA1O43805 MIR4466-201ENST00000606121 54 ntBASIC15.87■□□□□ 0.13
SSNA1O43805 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SSNA1O43805 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.87■□□□□ 0.13
SSNA1O43805 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSNA1O43805 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSNA1O43805 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SSNA1O43805 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SSNA1O43805 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 AC104417.2-201ENST00000562989 1793 ntBASIC15.86■□□□□ 0.13
SSNA1O43805 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.86■□□□□ 0.13
SSNA1O43805 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 AL118508.1-201ENST00000613502 2345 ntBASIC15.86■□□□□ 0.13
SSNA1O43805 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSNA1O43805 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.86■□□□□ 0.13
SSNA1O43805 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.86■□□□□ 0.13
SSNA1O43805 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.86■□□□□ 0.13
SSNA1O43805 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SSNA1O43805 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.86■□□□□ 0.13
SSNA1O43805 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSNA1O43805 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.86■□□□□ 0.13
SSNA1O43805 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSNA1O43805 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.86■□□□□ 0.13
SSNA1O43805 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.85■□□□□ 0.13
SSNA1O43805 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.85■□□□□ 0.13
SSNA1O43805 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.85■□□□□ 0.13
SSNA1O43805 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.85■□□□□ 0.13
SSNA1O43805 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSNA1O43805 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SSNA1O43805 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.85■□□□□ 0.13
SSNA1O43805 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.85■□□□□ 0.13
SSNA1O43805 KRT18P20-201ENST00000548986 1279 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms