Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 KRT8P11-201ENST00000409686 1436 ntBASIC18.92■□□□□ 0.62
RIPK2O43353 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.92■□□□□ 0.62
RIPK2O43353 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.92■□□□□ 0.62
RIPK2O43353 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.92■□□□□ 0.62
RIPK2O43353 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.92■□□□□ 0.62
RIPK2O43353 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
RIPK2O43353 AC083880.1-201ENST00000608266 535 ntBASIC18.92■□□□□ 0.62
RIPK2O43353 MIR5787-201ENST00000611784 55 ntBASIC18.92■□□□□ 0.62
RIPK2O43353 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RIPK2O43353 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.92■□□□□ 0.62
RIPK2O43353 AC012317.2-201ENST00000623305 2251 ntBASIC18.91■□□□□ 0.62
RIPK2O43353 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.91■□□□□ 0.62
RIPK2O43353 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 NBPF21P-201ENST00000425093 1451 ntBASIC18.91■□□□□ 0.62
RIPK2O43353 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RIPK2O43353 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 FLJ13224-201ENST00000313737 1514 ntBASIC18.91■□□□□ 0.62
RIPK2O43353 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RIPK2O43353 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 SLC29A4P1-201ENST00000398760 971 ntBASIC18.91■□□□□ 0.62
RIPK2O43353 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 IKBKGP1-201ENST00000612193 1073 ntBASIC18.91■□□□□ 0.62
RIPK2O43353 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RIPK2O43353 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 AC009053.2-201ENST00000563701 2365 ntBASIC18.91■□□□□ 0.62
RIPK2O43353 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RIPK2O43353 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIPK2O43353 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.91■□□□□ 0.62
RIPK2O43353 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RIPK2O43353 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.9■□□□□ 0.62
RIPK2O43353 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.9■□□□□ 0.62
RIPK2O43353 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RIPK2O43353 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
RIPK2O43353 AL645608.8-201ENST00000606034 2086 ntBASIC18.9■□□□□ 0.62
RIPK2O43353 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.9■□□□□ 0.62
RIPK2O43353 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.9■□□□□ 0.62
RIPK2O43353 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.9■□□□□ 0.62
RIPK2O43353 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.9■□□□□ 0.62
RIPK2O43353 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.9■□□□□ 0.62
RIPK2O43353 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIPK2O43353 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RIPK2O43353 MYLKP1-201ENST00000509077 1580 ntBASIC18.89■□□□□ 0.62
RIPK2O43353 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RIPK2O43353 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RIPK2O43353 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RIPK2O43353 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RIPK2O43353 TSPY6P-201ENST00000448518 926 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms