Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NDUFS4O43181 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
NDUFS4O43181 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.82■□□□□ 0.44
NDUFS4O43181 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 AL137013.1-201ENST00000432946 1228 ntBASIC17.82■□□□□ 0.44
NDUFS4O43181 AC010203.1-204ENST00000548782 407 ntBASIC17.82■□□□□ 0.44
NDUFS4O43181 WWOX-216ENST00000569818 525 ntBASIC17.82■□□□□ 0.44
NDUFS4O43181 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NDUFS4O43181 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NDUFS4O43181 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFS4O43181 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
NDUFS4O43181 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NDUFS4O43181 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDUFS4O43181 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
NDUFS4O43181 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDUFS4O43181 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
NDUFS4O43181 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 MIR564-202ENST00000385049 94 ntBASIC17.81■□□□□ 0.44
NDUFS4O43181 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.81■□□□□ 0.44
NDUFS4O43181 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.81■□□□□ 0.44
NDUFS4O43181 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
NDUFS4O43181 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.81■□□□□ 0.44
NDUFS4O43181 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
NDUFS4O43181 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFS4O43181 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.8■□□□□ 0.44
NDUFS4O43181 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDUFS4O43181 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 TERF1P1-201ENST00000311003 1181 ntBASIC17.8■□□□□ 0.44
NDUFS4O43181 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
NDUFS4O43181 AC009947.2-201ENST00000444014 672 ntBASIC17.8■□□□□ 0.44
NDUFS4O43181 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDUFS4O43181 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.8■□□□□ 0.44
NDUFS4O43181 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 AL499627.1-201ENST00000569373 2188 ntBASIC17.8■□□□□ 0.44
NDUFS4O43181 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS4O43181 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NDUFS4O43181 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
NDUFS4O43181 AC034236.2-201ENST00000606662 1610 ntBASIC17.8■□□□□ 0.44
NDUFS4O43181 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NDUFS4O43181 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 AC005521.1-201ENST00000393351 872 ntBASIC17.79■□□□□ 0.44
NDUFS4O43181 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms