Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.67■■□□□ 1.38
ABCC4O15439 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.67■■□□□ 1.38
ABCC4O15439 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.67■■□□□ 1.38
ABCC4O15439 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
ABCC4O15439 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 WIZP1-201ENST00000531444 2299 ntBASIC23.67■■□□□ 1.38
ABCC4O15439 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
ABCC4O15439 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.67■■□□□ 1.38
ABCC4O15439 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ABCC4O15439 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCC4O15439 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.66■■□□□ 1.38
ABCC4O15439 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 AL450487.1-201ENST00000426799 995 ntBASIC23.66■■□□□ 1.38
ABCC4O15439 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.66■■□□□ 1.38
ABCC4O15439 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.66■■□□□ 1.38
ABCC4O15439 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.66■■□□□ 1.38
ABCC4O15439 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
ABCC4O15439 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.66■■□□□ 1.38
ABCC4O15439 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.66■■□□□ 1.38
ABCC4O15439 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ABCC4O15439 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.65■■□□□ 1.38
ABCC4O15439 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.65■■□□□ 1.38
ABCC4O15439 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.65■■□□□ 1.38
ABCC4O15439 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.65■■□□□ 1.38
ABCC4O15439 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.65■■□□□ 1.38
ABCC4O15439 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
ABCC4O15439 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
ABCC4O15439 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.65■■□□□ 1.38
ABCC4O15439 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.65■■□□□ 1.38
ABCC4O15439 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.65■■□□□ 1.38
ABCC4O15439 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.65■■□□□ 1.38
ABCC4O15439 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.65■■□□□ 1.38
ABCC4O15439 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCC4O15439 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.64■■□□□ 1.38
ABCC4O15439 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCC4O15439 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.64■■□□□ 1.38
ABCC4O15439 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.64■■□□□ 1.38
ABCC4O15439 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.64■■□□□ 1.38
ABCC4O15439 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCC4O15439 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.64■■□□□ 1.37
ABCC4O15439 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCC4O15439 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ABCC4O15439 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.64■■□□□ 1.37
ABCC4O15439 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.64■■□□□ 1.37
ABCC4O15439 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCC4O15439 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
ABCC4O15439 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.63■■□□□ 1.37
ABCC4O15439 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ABCC4O15439 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
ABCC4O15439 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCC4O15439 AC034236.2-201ENST00000606662 1610 ntBASIC23.62■■□□□ 1.37
ABCC4O15439 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCC4O15439 TPM4P1-201ENST00000436100 807 ntBASIC23.62■■□□□ 1.37
ABCC4O15439 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.62■■□□□ 1.37
ABCC4O15439 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.62■■□□□ 1.37
ABCC4O15439 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCC4O15439 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCC4O15439 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.62■■□□□ 1.37
ABCC4O15439 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
ABCC4O15439 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCC4O15439 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms