Protein–RNA interactions for Protein: O00505

KPNA3, Importin subunit alpha-4, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3O00505 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.72■□□□□ 0.59
KPNA3O00505 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.72■□□□□ 0.59
KPNA3O00505 AC104390.1-201ENST00000555663 520 ntBASIC18.72■□□□□ 0.59
KPNA3O00505 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.72■□□□□ 0.59
KPNA3O00505 AC116407.4-201ENST00000623319 1061 ntBASIC18.72■□□□□ 0.59
KPNA3O00505 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.72■□□□□ 0.59
KPNA3O00505 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.72■□□□□ 0.59
KPNA3O00505 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KPNA3O00505 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.72■□□□□ 0.59
KPNA3O00505 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KPNA3O00505 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.71■□□□□ 0.59
KPNA3O00505 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
KPNA3O00505 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.71■□□□□ 0.59
KPNA3O00505 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 Z98044.1-201ENST00000632503 1764 ntBASIC18.71■□□□□ 0.59
KPNA3O00505 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KPNA3O00505 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KPNA3O00505 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.71■□□□□ 0.59
KPNA3O00505 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.71■□□□□ 0.59
KPNA3O00505 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.71■□□□□ 0.59
KPNA3O00505 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.71■□□□□ 0.59
KPNA3O00505 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.71■□□□□ 0.59
KPNA3O00505 AC093458.2-201ENST00000623150 629 ntBASIC18.71■□□□□ 0.59
KPNA3O00505 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.71■□□□□ 0.59
KPNA3O00505 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.71■□□□□ 0.59
KPNA3O00505 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
KPNA3O00505 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA3O00505 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
KPNA3O00505 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.71■□□□□ 0.58
KPNA3O00505 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA3O00505 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KPNA3O00505 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA3O00505 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 SPDYE13P-201ENST00000445314 798 ntBASIC18.7■□□□□ 0.58
KPNA3O00505 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA3O00505 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
KPNA3O00505 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA3O00505 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.7■□□□□ 0.58
KPNA3O00505 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
KPNA3O00505 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KPNA3O00505 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA3O00505 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KPNA3O00505 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA3O00505 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA3O00505 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.69■□□□□ 0.58
KPNA3O00505 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA3O00505 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KPNA3O00505 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KPNA3O00505 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.69■□□□□ 0.58
KPNA3O00505 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.69■□□□□ 0.58
KPNA3O00505 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA3O00505 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.69■□□□□ 0.58
KPNA3O00505 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms