Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.21■□□□□ 0.51
EIF3FO00303 TSPY15P-201ENST00000457163 923 ntBASIC18.21■□□□□ 0.51
EIF3FO00303 AC126763.1-201ENST00000552015 2118 ntBASIC18.21■□□□□ 0.51
EIF3FO00303 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EIF3FO00303 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EIF3FO00303 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EIF3FO00303 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EIF3FO00303 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EIF3FO00303 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.21■□□□□ 0.51
EIF3FO00303 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.21■□□□□ 0.51
EIF3FO00303 CYP2D8P-201ENST00000433633 1490 ntBASIC18.2■□□□□ 0.5
EIF3FO00303 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
EIF3FO00303 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.2■□□□□ 0.5
EIF3FO00303 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.2■□□□□ 0.5
EIF3FO00303 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
EIF3FO00303 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
EIF3FO00303 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
EIF3FO00303 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.2■□□□□ 0.5
EIF3FO00303 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.2■□□□□ 0.5
EIF3FO00303 KRT8P50-201ENST00000562022 1438 ntBASIC18.2■□□□□ 0.5
EIF3FO00303 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.2■□□□□ 0.5
EIF3FO00303 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EIF3FO00303 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
EIF3FO00303 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EIF3FO00303 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.19■□□□□ 0.5
EIF3FO00303 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.19■□□□□ 0.5
EIF3FO00303 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
EIF3FO00303 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.19■□□□□ 0.5
EIF3FO00303 KRT8P9-201ENST00000558927 1449 ntBASIC18.19■□□□□ 0.5
EIF3FO00303 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.19■□□□□ 0.5
EIF3FO00303 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
EIF3FO00303 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.19■□□□□ 0.5
EIF3FO00303 MIR3180-4-201ENST00000582223 153 ntBASIC18.19■□□□□ 0.5
EIF3FO00303 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.19■□□□□ 0.5
EIF3FO00303 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
EIF3FO00303 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.19■□□□□ 0.5
EIF3FO00303 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EIF3FO00303 AC009113.1-201ENST00000570267 2443 ntBASIC18.19■□□□□ 0.5
EIF3FO00303 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.19■□□□□ 0.5
EIF3FO00303 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EIF3FO00303 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.18■□□□□ 0.5
EIF3FO00303 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
EIF3FO00303 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 HMGA1P5-201ENST00000412453 271 ntBASIC18.18■□□□□ 0.5
EIF3FO00303 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.18■□□□□ 0.5
EIF3FO00303 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.18■□□□□ 0.5
EIF3FO00303 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.18■□□□□ 0.5
EIF3FO00303 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.18■□□□□ 0.5
EIF3FO00303 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.18■□□□□ 0.5
EIF3FO00303 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EIF3FO00303 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms