Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC53A6NM62 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC53A6NM62 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC53A6NM62 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC53A6NM62 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC53A6NM62 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC53A6NM62 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC53A6NM62 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
LRRC53A6NM62 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC53A6NM62 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.07■□□□□ 0.8
LRRC53A6NM62 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 AC008622.2-201ENST00000617006 1229 ntBASIC20.07■□□□□ 0.8
LRRC53A6NM62 AL359736.2-201ENST00000621992 437 ntBASIC20.07■□□□□ 0.8
LRRC53A6NM62 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 AC093677.2-201ENST00000600169 1863 ntBASIC20.07■□□□□ 0.8
LRRC53A6NM62 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC53A6NM62 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC53A6NM62 AL109659.2-201ENST00000606809 1674 ntBASIC20.07■□□□□ 0.8
LRRC53A6NM62 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 AC008764.6-201ENST00000595909 2069 ntBASIC20.06■□□□□ 0.8
LRRC53A6NM62 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 ESPNP-201ENST00000270691 2015 ntBASIC20.06■□□□□ 0.8
LRRC53A6NM62 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 MYLKP1-201ENST00000509077 1580 ntBASIC20.06■□□□□ 0.8
LRRC53A6NM62 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC53A6NM62 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC53A6NM62 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC53A6NM62 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC53A6NM62 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC53A6NM62 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC53A6NM62 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC53A6NM62 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.05■□□□□ 0.8
LRRC53A6NM62 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms