Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 AC087499.1-201ENST00000418141 1075 ntBASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 NOC2LP1-202ENST00000452600 2235 ntBASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV5S1A1TA0A578 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 AC104390.1-201ENST00000555663 520 ntBASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV5S1A1TA0A578 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.39■□□□□ 0.7
TCRBV5S1A1TA0A578 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV5S1A1TA0A578 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV5S1A1TA0A578 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.39■□□□□ 0.7
TCRBV5S1A1TA0A578 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV5S1A1TA0A578 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV5S1A1TA0A578 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV5S1A1TA0A578 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV5S1A1TA0A578 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV5S1A1TA0A578 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms