Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 AC131281.2-201ENST00000520478 145 ntBASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 AC100791.3-201ENST00000617619 330 ntBASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 RASA4CP-201ENST00000424092 1398 ntBASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 AC135776.1-201ENST00000319817 2481 ntBASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 AL162412.1-201ENST00000567129 965 ntBASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 TFP1-202ENST00000475455 1573 ntBASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV13-2A0A0B4J235 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV13-2A0A0B4J235 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms