Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 MIR4785-201ENST00000585005 73 ntBASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 AC096733.2-201ENST00000609937 1394 ntBASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 AC006333.2-201ENST00000607957 2099 ntBASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DRB4X5D2U9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 NOC2LP2-201ENST00000407594 1944 ntBASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms