Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB13Q9Y5F0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCDHB13Q9Y5F0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PCDHB13Q9Y5F0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 HMGA1P5-201ENST00000412453 271 ntBASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 AL512604.3-201ENST00000569583 964 ntBASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 WWOX-216ENST00000569818 525 ntBASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 CFTRP2-201ENST00000634304 199 ntBASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB13Q9Y5F0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 CR769767.2-201ENST00000622735 460 ntBASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 AC133561.5-201ENST00000635547 218 ntBASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 MYC-208ENST00000641036 567 ntBASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB13Q9Y5F0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 AC036111.1-201ENST00000533973 1582 ntBASIC20.55■□□□□ 0.88
PCDHB13Q9Y5F0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 AC112777.1-201ENST00000540175 1423 ntBASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 AC034236.2-201ENST00000606662 1610 ntBASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB13Q9Y5F0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms