Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 CHCHD2P8-201ENST00000429873 447 ntBASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 KRT18P1-202ENST00000452408 1331 ntBASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRG3Q9Y2Y8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 AC068587.9-201ENST00000641814 219 ntBASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.92■□□□□ 0.78
PRG3Q9Y2Y8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 Z83836.1-201ENST00000624605 1642 ntBASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 AC026396.1-201ENST00000419388 421 ntBASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.91■□□□□ 0.78
PRG3Q9Y2Y8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRG3Q9Y2Y8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms