Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 KRT8P45-201ENST00000414328 1447 ntBASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 IKBKGP1-201ENST00000612193 1073 ntBASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SAMD4AQ9UPU9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.46■□□□□ 0.38
SAMD4AQ9UPU9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAMD4AQ9UPU9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 AC083880.1-201ENST00000608266 535 ntBASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.44■□□□□ 0.38
SAMD4AQ9UPU9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 AC138028.4-201ENST00000564984 1845 ntBASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SAMD4AQ9UPU9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms