Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 AL355802.2-201ENST00000402069 882 ntBASIC16.63■□□□□ 0.25
COPS3Q9UNS2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 AL023875.1-201ENST00000640777 796 ntBASIC16.63■□□□□ 0.25
COPS3Q9UNS2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS3Q9UNS2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 AL162741.1-201ENST00000565563 1558 ntBASIC16.62■□□□□ 0.25
COPS3Q9UNS2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.62■□□□□ 0.25
COPS3Q9UNS2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 KRT8P32-201ENST00000512863 1461 ntBASIC16.61■□□□□ 0.25
COPS3Q9UNS2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 KRASP1-201ENST00000407852 552 ntBASIC16.61■□□□□ 0.25
COPS3Q9UNS2 KRT17P3-201ENST00000420566 1262 ntBASIC16.61■□□□□ 0.25
COPS3Q9UNS2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms