Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 LETM1P2-201ENST00000597330 2178 ntBASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 ECEL1P2-202ENST00000465689 757 ntBASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 AC007613.1-201ENST00000572811 2597 ntBASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 HMGA1P5-201ENST00000412453 271 ntBASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PPARGC1AQ9UBK2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 AL023284.2-201ENST00000405850 579 ntBASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 MIR4674-201ENST00000582457 87 ntBASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 AC083906.6-201ENST00000641366 219 ntBASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 AC068587.9-201ENST00000641814 219 ntBASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 AC005082.1-201ENST00000413042 2259 ntBASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPARGC1AQ9UBK2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 AL138781.2-201ENST00000617896 1843 ntBASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.39■□□□□ 0.7
PPARGC1AQ9UBK2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms