Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.11■□□□□ 0.33
LRFN1Q9P244 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRFN1Q9P244 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN1Q9P244 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
LRFN1Q9P244 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
LRFN1Q9P244 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 MIR3917-201ENST00000580971 93 ntBASIC17.1■□□□□ 0.33
LRFN1Q9P244 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 AC069148.1-201ENST00000608741 768 ntBASIC17.1■□□□□ 0.33
LRFN1Q9P244 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 AL157888.1-201ENST00000631930 593 ntBASIC17.1■□□□□ 0.33
LRFN1Q9P244 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 HOXB1-202ENST00000577092 1414 ntBASIC17.1■□□□□ 0.33
LRFN1Q9P244 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN1Q9P244 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN1Q9P244 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 AC034236.2-201ENST00000606662 1610 ntBASIC17.09■□□□□ 0.33
LRFN1Q9P244 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRFN1Q9P244 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN1Q9P244 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN1Q9P244 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.08■□□□□ 0.33
LRFN1Q9P244 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN1Q9P244 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN1Q9P244 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN1Q9P244 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN1Q9P244 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRFN1Q9P244 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.08■□□□□ 0.32
LRFN1Q9P244 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.08■□□□□ 0.32
LRFN1Q9P244 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LRFN1Q9P244 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.08■□□□□ 0.32
LRFN1Q9P244 AL645929.1-201ENST00000420084 975 ntBASIC17.08■□□□□ 0.32
LRFN1Q9P244 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 SPDYE13P-201ENST00000445314 798 ntBASIC17.08■□□□□ 0.32
LRFN1Q9P244 AC104390.1-201ENST00000555663 520 ntBASIC17.08■□□□□ 0.32
LRFN1Q9P244 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.08■□□□□ 0.32
LRFN1Q9P244 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN1Q9P244 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms