Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.07■□□□□ 0.96
COL20A1Q9P218 KRT8P26-201ENST00000534154 1276 ntBASIC21.07■□□□□ 0.96
COL20A1Q9P218 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL20A1Q9P218 AL121672.3-201ENST00000608644 468 ntBASIC21.07■□□□□ 0.96
COL20A1Q9P218 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL20A1Q9P218 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.07■□□□□ 0.96
COL20A1Q9P218 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL20A1Q9P218 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL20A1Q9P218 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL20A1Q9P218 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.07■□□□□ 0.96
COL20A1Q9P218 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL20A1Q9P218 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL20A1Q9P218 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL20A1Q9P218 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 TSPY22P-201ENST00000427496 604 ntBASIC21.06■□□□□ 0.96
COL20A1Q9P218 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.06■□□□□ 0.96
COL20A1Q9P218 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL20A1Q9P218 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 KRT126P-201ENST00000549467 1181 ntBASIC21.05■□□□□ 0.96
COL20A1Q9P218 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.05■□□□□ 0.96
COL20A1Q9P218 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL20A1Q9P218 AL499627.1-201ENST00000569373 2188 ntBASIC21.04■□□□□ 0.96
COL20A1Q9P218 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 Z83836.1-201ENST00000624605 1642 ntBASIC21.04■□□□□ 0.96
COL20A1Q9P218 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 AL121894.2-201ENST00000602977 491 ntBASIC21.04■□□□□ 0.96
COL20A1Q9P218 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL20A1Q9P218 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL20A1Q9P218 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 AP002414.4-201ENST00000589764 1148 ntBASIC21.03■□□□□ 0.96
COL20A1Q9P218 AC005332.3-201ENST00000589904 676 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms