Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 AL121906.2-201ENST00000621597 723 ntBASIC18.05■□□□□ 0.48
NDE1Q9NXR1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDE1Q9NXR1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 HEIH-201ENST00000623091 1652 ntBASIC18.04■□□□□ 0.48
NDE1Q9NXR1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 AC137761.2-201ENST00000561729 223 ntBASIC18.04■□□□□ 0.48
NDE1Q9NXR1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 AC145350.3-201ENST00000569033 163 ntBASIC18.04■□□□□ 0.48
NDE1Q9NXR1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDE1Q9NXR1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.03■□□□□ 0.48
NDE1Q9NXR1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 KRT18P16-201ENST00000510337 1294 ntBASIC18.03■□□□□ 0.48
NDE1Q9NXR1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms