Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 C1QL1P1-201ENST00000568105 661 ntBASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LIN7CQ9NUP9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIN7CQ9NUP9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 ABALON-201ENST00000629058 1903 ntBASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 AL162741.1-201ENST00000565563 1558 ntBASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
LIN7CQ9NUP9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 HTR7P1-201ENST00000538670 1336 ntBASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms