Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN3Q9NQS3 AC104581.1-202ENST00000635932 2618 ntBASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 AC141586.3-201ENST00000562166 1838 ntBASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN3Q9NQS3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 AC012306.2-201ENST00000609350 630 ntBASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.86■□□□□ 0.45
NECTIN3Q9NQS3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 INGX-201ENST00000359239 846 ntBASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms