Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HMG20AQ9NP66 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20AQ9NP66 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20AQ9NP66 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
HMG20AQ9NP66 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HMG20AQ9NP66 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20AQ9NP66 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.96■□□□□ 0.3
HMG20AQ9NP66 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 OR10C1-204ENST00000622521 1039 ntBASIC16.95■□□□□ 0.3
HMG20AQ9NP66 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HMG20AQ9NP66 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 PTBP1P-201ENST00000554374 1601 ntBASIC16.94■□□□□ 0.3
HMG20AQ9NP66 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 AC135776.1-201ENST00000319817 2481 ntBASIC16.94■□□□□ 0.3
HMG20AQ9NP66 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20AQ9NP66 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20AQ9NP66 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms