Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 HEIH-201ENST00000623091 1652 ntBASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 FAAHP1-202ENST00000446499 1238 ntBASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 FDX1P1-201ENST00000449115 551 ntBASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 EMBP1-201ENST00000458200 901 ntBASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 AC024563.2-201ENST00000603282 481 ntBASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 AC093484.2-201ENST00000580996 2166 ntBASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP3Q9H6T3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 AC091304.2-201ENST00000564639 760 ntBASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 AL121772.3-201ENST00000610840 674 ntBASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 KRT8P50-201ENST00000562022 1438 ntBASIC21.44■■□□□ 1.02
RPAP3Q9H6T3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 AC104819.1-201ENST00000504587 486 ntBASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 AC074051.2-201ENST00000565115 352 ntBASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP3Q9H6T3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 MTMR9LP-203ENST00000426597 1545 ntBASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 KRT17P6-201ENST00000453795 1220 ntBASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 KRT18P31-201ENST00000506277 1292 ntBASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 LINC00167-201ENST00000530583 1419 ntBASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 AC233702.3-201ENST00000578656 1387 ntBASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.42■■□□□ 1.02
RPAP3Q9H6T3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms